CI stages

.gitlab-ci.yml

@@ -2,21 +2,29 @@
 before_script:
   - module load astrocyte/0.1.0
 
+
+stages:
+    - check
+    - test
+
 # This performs validation of the astrocyte_pkg.yml file
-check:
+astrocyte_check:
+  stage: check
   script:
   - astrocyte_cli check "$CI_PROJECT_DIR"
 
 # This runs the workflow with test data and does a simple
 # check for the expected output file
-test:
+astrocyte_test:
+  stage: test
   script:
   - astrocyte_cli test "$CI_PROJECT_DIR"
   - test -s "$CI_PROJECT_DIR/workflow/output/mobydick.txt.uppercase.tolines.wordcount"
 
 # This verifies we can install the shiny vizapp dependencies
 # and start the vizapp running.
-shiny:
+astrocyte_shiny:
+  stage: test
   script:
   - astrocyte_cli shiny-prepare "$CI_PROJECT_DIR"
   - 'timeout 10 astrocyte_cli shiny "$CI_PROJECT_DIR" &'