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Created with Raphaël 2.2.011Mar109875Feb31Jan2522191815141312111098765427Dec26252417162Nov131Oct14Aug1311226Jul252429Jun2726258May16Mar1515Feb1413Jan121110529Nov21201918171615141031Oct30292827262524232220181711109876543130Sep28272620131289May26Apr25242115Mar310Feb83231Jan262529Dec2728Nov218Merge branch 'master' into 21-software_versionsMerge branch 'master' into 31-skip_stepsFirst Multiqc config.Merge branch '23-rename_output' into 'master'Add in software versions.Fix stage of test.Update tests and add a skip test that only runs on branches.Add in skipping of diffBind and motif search.Only run certain tests on branches vs master.Fix diff peaks output for single end.Remove subprocess.Add in software version parsing.Fix test output.Remove extra bwa command.Fix rename.Pin versions with corrected syntax.Pin versions.;Update items to install.Add in correct shuffle step. Fix output directory. #28.Update where test files are coming from.Update git ignore.Update tests and merge.Merge branch '27_pdfs_plots' into 'master'edited png to pdfadded manualadded manualadded manualadded manualchange png to pdfIf negative fragmentlength default to 200.Merge branch '23-rename_output' into 24-astrocyteFix the missing parathesis.Fix test output.add Pearson Correlation, make plots pdfSplit tests to make more readable.Modify tests.Fix output directories and file names.Fix Trim reads output to match.Update tests and output file names.