Commits · 53ea1c71eaca48175b455b07e68cc3af1de5a0eb · Astrocyte / Workflows / BICF / chipseq_analysis

Jul 16, 2019
- import shutils · 53ea1c71
  Jeremy Mathews authored 5 years ago
  
  53ea1c71
- generate fake B_1.bedse.gz file · f47e96ee
  Jeremy Mathews authored 5 years ago
  
  f47e96ee
- generate fake B_1.bedse.gz file · 01331989
  Jeremy Mathews authored 5 years ago
  
  01331989
- remove errors from generate_design function · 23a9f247
  Jeremy Mathews authored 5 years ago
  
  23a9f247
- create function generate_design. update test · e56be52c
  Jeremy Mathews authored 5 years ago
  
  e56be52c
- change sys.argv[1] · b07b272c
  Jeremy Mathews authored 5 years ago
  
  b07b272c
- change sys.argv[1] · 71f50d9b
  Jeremy Mathews authored 5 years ago
  
  71f50d9b
- change sys.argv[1] · 8e4b252a
  Jeremy Mathews authored 5 years ago
  
  8e4b252a
- change sys.argv[0] · 351d07bc
  Jeremy Mathews authored 5 years ago
  
  351d07bc
- remove paired and cutoff argvs · e3cac80e
  Jeremy Mathews authored 5 years ago
  
  e3cac80e
- remove paired and cutoff argvs · d3e06827
  Jeremy Mathews authored 5 years ago
  
  d3e06827
- update argv arguments · a25c3f5c
  Jeremy Mathews authored 5 years ago
  
  a25c3f5c
- update argv arguments · 75f9f641
  Jeremy Mathews authored 5 years ago
  
  75f9f641
- update argv arguments · 30c4173a
  Jeremy Mathews authored 5 years ago
  
  30c4173a
- update argv arguments · bea49ca3
  Jeremy Mathews authored 5 years ago
  
  bea49ca3
- update argv arguments · 4379c348
  Jeremy Mathews authored 5 years ago
  
  4379c348
- push arg parser · 29b71505
  Jeremy Mathews authored 5 years ago
  
  29b71505
- push arg parser · 50cc95e7
  Jeremy Mathews authored 5 years ago
  
  50cc95e7
- push arg parser · 3c002963
  Jeremy Mathews authored 5 years ago
  
  3c002963
- push arg parser · d60f2438
  Jeremy Mathews authored 5 years ago
  
  d60f2438
- Add arg parser to pytest · 58c71ef9
  Jeremy Mathews authored 5 years ago
  
  58c71ef9
Jul 15, 2019
- update pool and psuedo test · f42d1727
  Jeremy Mathews authored 5 years ago
  
  f42d1727
- update tests for pool and psuedoreplicates · e505acc3
  Jeremy Mathews authored 5 years ago
  
  e505acc3
- revert to original · 06ef989b
  Jeremy Mathews authored 5 years ago
  
  06ef989b
- quote input variables in unit test · 9c9fbeb5
  Jeremy Mathews authored 5 years ago
  
  9c9fbeb5
- fix error in pool and psuedoreplicates · 2c225f3c
  Jeremy Mathews authored 5 years ago
  
  2c225f3c
- fix syntax in test · e9fae142
  Jeremy Mathews authored 5 years ago
  
  e9fae142
- test pool and psuedoreplicate for single experiment · 0158a2a0
  Jeremy Mathews authored 5 years ago
  
  0158a2a0
Jul 12, 2019
- Update CHANGELOG.md and index.md · a9bc7536
  Jeremy Mathews authored 5 years ago
  
  a9bc7536
- Merge branch '58-single-rep' · 8dac2f27
  Jeremy Mathews authored 5 years ago
  
  8dac2f27
- Merge branch '29-PlotProfile' · 4a7bba6b
  Jeremy Mathews authored 5 years ago
  
  4a7bba6b
- Add Plot Profile. Add python version to multiqc. · d41309dc
  Jeremy Mathews authored 5 years ago
  
  d41309dc
Jul 11, 2019
- Merge branch 'patch-1' into 'master' · ab738147
  Venkat Malladi authored 5 years ago
```
Update references.md

See merge request BICF/Astrocyte/chipseq_analysis!52
```
  ab738147
Jul 10, 2019
- Update indentation error · 2d5cbb2e
  Jeremy Mathews authored 5 years ago
  
  2d5cbb2e
- Merge branch '55-bugfix' into 'master' · 90e47425
  Venkat Malladi authored 5 years ago
```
Update gitignore with nextflow and update software reference test

Closes #55

See merge request BICF/Astrocyte/chipseq_analysis!53
```
  90e47425
- Update references.md · 8a3087d5
  Jeremy Mathews authored 5 years ago
  
  8a3087d5
Jul 09, 2019
- Update gitignore with nextflow and update software reference test · 567ee0eb
  Jeremy Mathews authored 5 years ago
  
  567ee0eb
- Merge branch '55-CheckGenomeMapPeaks' into 'master' · eaeb2b1c
  Venkat Malladi authored 5 years ago
```
Issues #57 and #59 cause Spencer said today

Closes #57 and #59

See merge request BICF/Astrocyte/chipseq_analysis!50
```
  eaeb2b1c
- Update CHANGELOG.md · bef64a12
  Jeremy Mathews authored 5 years ago
  
  bef64a12
Jul 08, 2019
- Resolve merge Conflict · b36522ca
  Jeremy Mathews authored 5 years ago
  
  b36522ca