Skip to content
Snippets Groups Projects
Commit fe188a10 authored by Venkat Malladi's avatar Venkat Malladi
Browse files

Add in Resume option.

parent 2b4d340c
No related merge requests found
Hide whitespace changes
Inline Side-by-side
Showing
with 2 additions and 2 deletions
.gitlab-ci.yml
+ 2
− 2
View file @ fe188a10
...@@ -16,7 +16,7 @@ user_configuration: ...@@ -16,7 +16,7 @@ user_configuration:
single_end_mouse: single_end_mouse:
stage: integration stage: integration
script: script:
- nextflow run workflow/main.nf - nextflow run workflow/main.nf -resume
- pytest -m integration - pytest -m integration
- pytest --cov=./workflow/scripts - pytest --cov=./workflow/scripts
artifacts: artifacts:
...@@ -25,6 +25,6 @@ single_end_mouse: ...@@ -25,6 +25,6 @@ single_end_mouse:
paired_end_human: paired_end_human:
stage: integration stage: integration
script: script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR729LGA_PE.txt" --genome 'GRCh38' --pairedEnd true - nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR729LGA_PE.txt" --genome 'GRCh38' --pairedEnd true -resume
artifacts: artifacts:
expire_in: 2 days expire_in: 2 days
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment