Fix options.

f545947d · Venkat Malladi · 6bc954e9 · f545947d
Commit f545947d authored 7 years ago by Venkat Malladi
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -239,12 +239,12 @@ process crossReads {

  if (pairedEnd) {
    """
-    python3 $baseDir/scripts/xcor.py -b $seTagAlign -p
+    python3 $baseDir/scripts/xcor.py -t $seTagAlign -p
    """
  }
  else {
    """
-    python3 $baseDir/scripts/xcor.py -b $seTagAlign
+    python3 $baseDir/scripts/xcor.py -t $seTagAlign
    """
  }