Merge branch '6-deeptools' into 'master' (e914ddd5) · Commits · Astrocyte / Workflows / BICF / chipseq_analysis · GitLab

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e914ddd5

Commit e914ddd5 authored 7 years ago by

Venkat Malladi

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Merge branch '6-deeptools' into 'master'

Resolve "Update deeptools"

Closes #6

See merge request !8

parents a1fdbeab b8c85d1e

Changes 10

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astrocyte_pkg.yml 1 addition, 0 deletions

astrocyte_pkg.yml
test_data/design_ENCSR238SGC_SE.txt 4 additions, 4 deletions

test_data/design_ENCSR238SGC_SE.txt
test_data/design_ENCSR729LGA_PE.txt 4 additions, 4 deletions

test_data/design_ENCSR729LGA_PE.txt
workflow/conf/biohpc.config 4 additions, 0 deletions

workflow/conf/biohpc.config
workflow/main.nf 27 additions, 0 deletions

workflow/main.nf
workflow/scripts/experiment_qc.py 177 additions, 0 deletions

workflow/scripts/experiment_qc.py
workflow/scripts/map_qc.py 2 additions, 2 deletions

workflow/scripts/map_qc.py
workflow/scripts/runDeepTools.py 0 additions, 81 deletions

workflow/scripts/runDeepTools.py
workflow/tests/test_experiment_qc.py 42 additions, 0 deletions

workflow/tests/test_experiment_qc.py
workflow/tests/test_utils.py 1 addition, 1 deletion

workflow/tests/test_utils.py

with 262 additions and 92 deletions

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