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Commit c3be6be2 authored by Beibei Chen's avatar Beibei Chen
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update form

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astrocyte_pkg.yml
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...@@ -82,6 +82,12 @@ workflow_parameters: ...@@ -82,6 +82,12 @@ workflow_parameters:
description: | description: |
Bam files of all samples Bam files of all samples
- id: bais
type: files
required: true
description: |
Bam index files of all samples
- id: peaks - id: peaks
type: files type: files
required: true required: true
...@@ -96,7 +102,7 @@ workflow_parameters: ...@@ -96,7 +102,7 @@ workflow_parameters:
A design file listing pairs of sample name and sample group. Must be in csv format A design file listing pairs of sample name and sample group. Must be in csv format
Columns must include: SampleID,Tissue, Factor, Condition, Replicate, Peaks, bamReads, bamControl, ControlID, PeakCaller Columns must include: SampleID,Tissue, Factor, Condition, Replicate, Peaks, bamReads, bamControl, ControlID, PeakCaller
- id: genome - id: genomepath
type: select type: select
choices: choices:
- [ '/project/shared/bicf_workflow_ref/GRCh38', 'hg38'] - [ '/project/shared/bicf_workflow_ref/GRCh38', 'hg38']
...@@ -106,7 +112,7 @@ workflow_parameters: ...@@ -106,7 +112,7 @@ workflow_parameters:
description: | description: |
Reference genome for annotation Reference genome for annotation
- id: toppeak - id: toppeakcount
type: integer type: integer
required: true required: true
description: | description: |
......
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