Skip to content
Snippets Groups Projects
Commit 970fea4b authored by Venkat Malladi's avatar Venkat Malladi
Browse files

Use python3 for testing the design file and use local for this.

parent 0205044c
No related merge requests found
...@@ -5,6 +5,7 @@ process { ...@@ -5,6 +5,7 @@ process {
// Process specific configuration // Process specific configuration
$checkDesignFile { $checkDesignFile {
module = ['python/3.6.1-2-anaconda'] module = ['python/3.6.1-2-anaconda']
executor = 'local'
} }
$trim_galore { $trim_galore {
module = ['python/3.6.1-2-anaconda', 'trimgalore/0.4.1'] module = ['python/3.6.1-2-anaconda', 'trimgalore/0.4.1']
......
...@@ -48,7 +48,7 @@ process checkDesignFile { ...@@ -48,7 +48,7 @@ process checkDesignFile {
if (pairedEnd) { if (pairedEnd) {
""" """
python $baseDir/scripts/check_design.py -d $designFile -f $readsList -p python3 $baseDir/scripts/check_design.py -d $designFile -f $readsList -p
""" """
} }
else { else {
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment