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chipseq_analysis
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Astrocyte
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BICF
chipseq_analysis
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8b57e672
Commit
8b57e672
authored
5 years ago
by
Venkat Malladi
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Update software version test python.
parent
60b877d9
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2 changed files
workflow/scripts/generate_versions.py
+1
-1
1 addition, 1 deletion
workflow/scripts/generate_versions.py
workflow/tests/test_generate_software_versions.py
+1
-0
1 addition, 0 deletions
workflow/tests/test_generate_software_versions.py
with
2 additions
and
1 deletion
workflow/scripts/generate_versions.py
+
1
−
1
View file @
8b57e672
...
...
@@ -46,7 +46,7 @@ SOFTWARE_REGEX = {
'
MEME-ChIP
'
:
[
'
motifSearch_vf/version_memechip.txt
'
,
r
"
Version (\S+)
"
],
'
DiffBind
'
:
[
'
diffPeaks_vf/version_DiffBind.txt
'
,
r
"
Version (\S+)\"
"
],
'
deepTools
'
:
[
'
experimentQC_vf/version_deeptools.txt
'
,
r
"
deeptools (\S+)
"
],
'
Python
'
:
[
'
version_python.txt
'
,
r
"
p
ython
, version
(\S+)
"
],
'
Python
'
:
[
'
version_python.txt
'
,
r
"
P
ython (\S+)
"
],
'
MultiQC
'
:
[
'
version_multiqc.txt
'
,
r
"
multiqc, version (\S+)
"
],
}
...
...
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workflow/tests/test_generate_software_versions.py
+
1
−
0
View file @
8b57e672
...
...
@@ -21,3 +21,4 @@ def test_software_versions_output():
data_loaded
=
yaml
.
load
(
stream
)
assert
len
(
data_loaded
[
'
data
'
].
split
(
'
<dt>
'
))
==
18
assert
'
Not Run
'
not
in
data_loaded
[
'
data
'
].
split
(
'
<dt>
'
)[
17
]
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