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Commit 44146d5d authored by Venkat Malladi's avatar Venkat Malladi
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Updated split experiment pool objs function.

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...@@ -317,10 +317,8 @@ process poolAndPsuedoReads { ...@@ -317,10 +317,8 @@ process poolAndPsuedoReads {
// Collect list of experiment design files into a single channel // Collect list of experiment design files into a single channel
experimentRows = experimentPoolObjs experimentRows = experimentPoolObjs
.collect() .splitCsv(sep:'\t', header:true)
.splitCsv(sep:'\t', header: true) .map { row -> [ row.sample_id, row.tag_align, row.xcor, row.experiment_id, row.biosample, row.factor, row.treatment, row.replicate, row.control_id, row.control_tag_align] }
.flatten()
.map { row -> [ row[0], row[1], row[2], row[3], row[4], row[5], row[6], row[7], row[8], row[8]] }
// Call Peaks using MACS // Call Peaks using MACS
process callPeaksMACS { process callPeaksMACS {
......
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