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Commit 0936d82d authored by Venkat Malladi's avatar Venkat Malladi
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First Multiqc config.

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# Title to use for the report.
title: BICF ChIP-seq Analysis Report
report_comment: >
This report has been generated by the <a href="https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/" target="_blank">BICF/chipseq_analysis</a>
pipeline.
report_section_order:
software_versions:
order: -1000
extra_fn_clean_exts:
- '_R1'
- '_R2'
- 'pbc.qc'
fn_ignore_files:
- '*dedup.flagstat.qc'
custom_data:
library_complexity:
file_format: 'tsv'
id: 'library_complexity'
contents: 'TotalReadPairs DistinctReadPairs OneReadPair TwoReadPairs NRF PBC1 PBC2'
section_name: 'Library complexity'
plot_type: 'generalstats'
sp:
phantompeakqualtools/out:
fn: '*cc.qc'
library_complexity:
fn: '*pbc.qc'
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