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sc-TissueMapper_Pr
Commits
f1b1b031
Commit
f1b1b031
authored
6 years ago
by
Gervaise Henry
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update DEG Stress and NE genesets
parent
7b136f8d
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2 changed files
genesets/DEG.Stress.csv
+23
-27
23 additions, 27 deletions
genesets/DEG.Stress.csv
genesets/DEG_NE.csv
+68
-105
68 additions, 105 deletions
genesets/DEG_NE.csv
with
91 additions
and
132 deletions
genesets/DEG.Stress.csv
+
23
−
27
View file @
f1b1b031
"","p_val","avg_logFC","pct.1","pct.2","p_val_adj"
"JUN",0,3.52446619332614,0.97,0.579,0
"GADD45B",0,3.25814863485468,0.949,0.329,0
"EGR1",0,3.23237801038951,0.804,0.193,0
"FOS",0,3.03111276971855,0.895,0.491,0
"ATF3",0,2.71462329665876,0.866,0.252,0
"HES1",0,2.63289526569471,0.769,0.248,0
"JUNB",0,2.59936738347141,0.956,0.623,0
"IER2",0,2.57100457529959,0.892,0.521,0
"ZFP36",0,2.35880486416122,0.929,0.509,0
"NR4A1",0,2.19006681515921,0.713,0.142,0
"DDIT3",0,2.06653652151157,0.701,0.084,0
"ID1",0,1.96349454388333,0.733,0.286,0
"NFKBIA",0,1.88493996643466,0.946,0.794,0
"FOSB",0,1.87413931860456,0.747,0.289,0
"PPP1R15A",0,1.87016779081419,0.956,0.695,0
"KLF10",0,1.86789302002389,0.725,0.168,0
"KLF6",0,1.85522736466614,0.839,0.429,0
"NCOA7",0,1.82673949878027,0.604,0.206,0
"RHOB",0,1.76637179444964,0.674,0.136,0
"DUSP1",0,1.72958718365682,0.869,0.529,0
"ID3",0,1.71758331857321,0.668,0.167,0
"DNAJB1",0,1.71283463956435,0.694,0.216,0
"BTG2",0,1.67969758188443,0.676,0.254,0
"IER3",0,1.63391573730188,0.839,0.635,0
"HSPA1A",0,1.63277609618032,0.69,0.364,0
"IRF1",0,1.61744780502278,0.776,0.291,0
"GADD45G",0,1.61682572043469,0.524,0.054,0
"JUN",0,3.41481541534949,0.955,0.587,0
"EGR1",0,3.32138676402467,0.822,0.204,0
"FOS",0,2.92149404478528,0.902,0.506,0
"ATF3",0,2.78281099653756,0.883,0.26,0
"GADD45B",0,2.72351599865096,0.884,0.348,0
"IER2",0,2.65915606398209,0.923,0.528,0
"HES1",0,2.6041716672483,0.763,0.275,0
"JUNB",0,2.53458256488297,0.945,0.626,0
"EDN1",0,2.40593899755009,0.668,0.165,0
"NR4A1",0,2.24010134408017,0.703,0.149,0
"DDIT3",0,2.21417884464285,0.722,0.095,0
"ZFP36",0,2.14465250833242,0.897,0.517,0
"ID1",0,2.03204741119302,0.753,0.319,0
"NCOA7",0,2.02418437164608,0.704,0.205,0
"NFKBIA",0,1.99755343072867,0.981,0.778,0
"FOSB",0,1.98991035444373,0.8,0.302,0
"KLF6",0,1.88399481752359,0.887,0.433,0
"PPP1R15A",0,1.87594888546157,0.962,0.692,0
"KLF10",0,1.80986627981518,0.709,0.181,0
"RHOB",0,1.79643697576839,0.663,0.146,0
"BTG2",0,1.79537923079823,0.731,0.266,0
"DUSP1",0,1.79440993535098,0.881,0.545,0
"CXCL3",0,1.62698777739253,0.671,0.177,0
This diff is collapsed.
Click to expand it.
genesets/DEG_NE.csv
+
68
−
105
View file @
f1b1b031
...
...
@@ -2,111 +2,74 @@
"1","GRP"
"2","CHGA"
"3","SCG2"
"4","
SCG5
"
"5","
MS4A8
"
"6","
LY6H
"
"7","
TPH1
"
"8","
CALCA
"
"9","
PHGR1
"
"10","
RGS4
"
"11","
SCG3
"
"12","
JAKMIP2
"
"4","
TPH1
"
"5","
CALCA
"
"6","
SCG5
"
"7","
MS4A8
"
"8","
ASCL1
"
"9","
MAOB
"
"10","
LY6H
"
"11","
PHGR1
"
"12","
TAGLN3
"
"13","HEPACAM2"
"14","
MAOB
"
"15","
ERICH3
"
"16","
SLC18A1
"
"17","
NELL2
"
"18","R
IMBP2
"
"19","
KLK12
"
"20","
NKAIN2
"
"21","
NELL1
"
"22","
FIBCD1
"
"23","
LECT
1"
"24","
TAGLN3
"
"25","A
C013463.2
"
"26","
SYP
"
"27","C
ACNA1A
"
"28","
SLC38A1
1"
"29","S
CGN
"
"30","
OVOS2
"
"31","
ESPN
"
"32","C
HGB
"
"14","
SNAP25
"
"15","
MIAT
"
"16","
ZACN
"
"17","
SCG3
"
"18","R
GS4
"
"19","
MAP1A
"
"20","
FGF14
"
"21","
ST18
"
"22","
CDK5R2
"
"23","
NELL
1"
"24","
KLK12
"
"25","A
OC1
"
"26","
BEX1
"
"27","C
HGB
"
"28","
PLEKHB
1"
"29","S
YT1
"
"30","
TMEM176A
"
"31","
SLC38A11
"
"32","C
ACNA1A
"
"33","UCHL1"
"34","
BEX1
"
"35","
AC034243.1
"
"36","
PCSK1N
"
"37","P
LEKHB1
"
"38","
C1QTNF4
"
"39","
HOXA11
"
"40","
PRUNE2
"
"41","
TMEM178A
"
"42","
DNAJC1
2"
"34","
ENO2
"
"35","
FGF12
"
"36","
DNAJC12
"
"37","P
CSK1N
"
"38","
SYP
"
"39","
SLITRK6
"
"40","
GABRB3
"
"41","
QPCT
"
"42","
OVOS
2"
"43","TUBB2B"
"44","RAB17"
"45","KRT80"
"46","THSD7A"
"47","SYT1"
"48","VIPR1"
"49","RP11-481J2.4"
"50","NME7"
"51","PEG10"
"52","DNER"
"53","SPATA6"
"54","MYEF2"
"55","CHIC1"
"56","LINC01089"
"57","C3orf14"
"58","KANSL1L"
"59","RP11-489E7.4"
"60","C4orf48"
"61","IFT88"
"62","PRKCE"
"63","IGFBP5"
"64","TET2"
"65","ATP6V0E2"
"66","FRMD4A"
"67","SMOC2"
"68","MAP9"
"69","IZUMO4"
"70","TFF3"
"71","C11orf49"
"72","PGPEP1"
"73","DMAP1"
"74","ZNF428"
"75","PKIB"
"76","ZBTB20"
"77","TTC32"
"78","SPG11"
"79","QPCT"
"80","ITPR2"
"81","CEP164"
"82","RHBDD2"
"83","RP11-423H2.3"
"84","ATPIF1"
"85","TFIP11"
"86","N4BP2"
"87","RNF167"
"88","TP53BP1"
"89","U2AF1L4"
"90","AP1S1"
"91","MOSPD1"
"92","EZH1"
"93","NUDT16L1"
"94","RP5-1042K10.10"
"95","CCDC53"
"96","SNAP29"
"97","FAM174A"
"98","FRG1"
"99","ZNF451"
"100","PLS1"
"101","NAAA"
"102","GUF1"
"103","COG3"
"104","PTPN4"
"105","ABHD14A"
"106","DAPL1"
"107","ARRDC4"
"108","QDPR"
"109","GATA2"
"110","C22orf39"
"111","APOA1BP"
"44","MAPK8IP1"
"45","TMEM61"
"46","MAP9"
"47","DNER"
"48","C4orf48"
"49","TFF3"
"50","PKIB"
"51","MAP1B"
"52","IZUMO4"
"53","C3orf14"
"54","FAM174A"
"55","IFT172"
"56","ABHD14A"
"57","NEBL"
"58","SEC22C"
"59","RBP1"
"60","TTLL7"
"61","FAM46A"
"62","QDPR"
"63","ATPIF1"
"64","DNALI1"
"65","UBE2F"
"66","C10orf10"
"67","IFI6"
"68","TSHZ2"
"69","AP1S1"
"70","PIGT"
"71","VAMP2"
"72","DHCR24"
"73","NAAA"
"74","KIF5C"
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