* sc_Table (produce tables of population differences between samples)
* Genesets
* "regev\_lab\_cell\_cycle\_genes.txt" G2M and S phase genes from **Triosh et al, 2015**
* "regev\_lab\_cell\_cycle\_genes.txt" G2M and S phase genes from [*Genome Res. 2015 Dec; 25(12): 1860–1872*](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4665007/)
* "DEG\_C2.CGP.M10970.txt" MSigDB C2 Chemical and Genetic Perturbations M10970 **CHUANG\_OXIDATIVE\_STRESS\_RESPONSE\_UP**
* "DEG\_Epi_2FC.txt" DWS generated DEGs of Epithelia from FACS population (bulk) RNA-sequencing
* "DEG\_FMSt_2FC.txt" DWS generated DEGs of Fibromuscular Stroma from FACS population (bulk) RNA-sequencing
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@@ -41,7 +43,7 @@ Department: Urology
* "DEG\_C5.BP.M11704.txt" MSigDB C5 GO Biological Processes M11704 **GO\_CELL\_DIFFERENTIATION**
* "DEG\_C5.BP.M10794.txt" MSigDB C5 GO Biological Processes M10794 **GO\_SMOOTH\_MUSCLE\_CELL\_DIFFERENTIATION**
* "DEG\_C5.BP.M13024.txt" MSigDB C5 GO Biological Processes M13024 **GO\_REGULATION\_OF\_FIBROBLAST\_PROLIFERATION**
* "EurUrol.2005.NE.txt" Neuroendocrine markers from Table 1 of *"Neuroendocrine differentiation in prostate cancer: implecations for new treatment modalities" European Urology 47.2 (2005):147:155*
* "EurUrol.2005.NE.txt" Neuroendocrine markers from Table 1 of [*Eur Urol. 2005 Feb;47(2):147-55*](https://www.ncbi.nlm.nih.gov/pubmed/15661408)
* "Basal cells-signature-genes.csv" scRNA-Sequencing Lung Map generated top 20 DEGs for human lung Basal Cells
* "Normal AT2 cells-signature-genes.csv" scRNA-Sequecing Lung Map generated top 20 DEGs for human lung Alveolar Type 2 Cells
* "Club\_Goblet cells-signature-genes.csv" scRNA-Sequencing Lung Map generated top 20 DEGs for human lung Club/Goblet Cells
