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Commit c63d7a90 authored by Jonathan Gesell's avatar Jonathan Gesell
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Updated to current Azure environment

parent a6bac8c9
Branches 8-azure
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......@@ -4,21 +4,21 @@ process {
//Process-specific parameters
withName: checkDesignFile{
container = 'docker://bicf/bicfbase:1.1'
}
withName: downloadSRA {
container = 'docker://bicf/sratoolkit:1.1'
cpus 2
}
withName: rawFastQC {
container = 'docker://bicf/fastqc:1.1'
cpus 2
}
withName: rawMultiQC {
container = 'docker://bicf/multiqc:1.1'
cpus 2
}
}
singularity {
enabled = true
cacheDir = '/mnt/cyclecloudsa1/singularity'
}
//Trace File information
......
......@@ -5,6 +5,9 @@ profiles {
astrocyte {
includeConfig "conf/astrocyte.config"
}
azure {
includeConfig "conf/azure.config"
}
}
process {
......
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