Commits · master · BICF / Astrocyte / rnaseq

22 Mar, 2022 1 commit
- Merge branch 'master' into 'master' · 3b5cae03
  Jeon Lee authored Mar 22, 2022
```
Fix bugs in published version 2.0.0

See merge request !11
```
  3b5cae03
11 Mar, 2022 1 commit
- Fix the issue that no tracing is updated on webpage · 32f90acb
  Peng Lian authored Mar 11, 2022
  
  32f90acb
03 Mar, 2022 1 commit
- Escape slash for groove · fcb2d956
  Peng Lian authored Mar 03, 2022
  
  fcb2d956
02 Mar, 2022 9 commits
- Escape slash for groove · 86736f17
  Peng Lian authored Mar 02, 2022
  
  86736f17
- Escape slash for groove · d01043a3
  Peng Lian authored Mar 02, 2022
  
  d01043a3
- Update container version · 8e333198
  Peng Lian authored Mar 02, 2022
  
  8e333198
- Bugfix for permission issue · 978710b7
  Peng Lian authored Mar 02, 2022
  
  978710b7
- Update container structuralvariant · a76d224b
  Peng Lian authored Mar 02, 2022
  
  a76d224b
- Update Singularity · 11770d6d
  Peng Lian authored Mar 02, 2022
  
  11770d6d
- Enable containers · bdf493c8
  Peng Lian authored Mar 02, 2022
  
  bdf493c8
- Fix bug, is empty · c42cd0ff
  Peng Lian authored Mar 02, 2022
  
  c42cd0ff
- Add support for Astrocyte · 4c4442d9
  Peng Lian authored Mar 02, 2022
  
  4c4442d9
22 Feb, 2022 2 commits
- Change submodule strategy to not clone miscscripts in process_scripts · 061b09bf
  Peng Lian authored Feb 22, 2022
  
  061b09bf
- Add submodule of process_scripts · 9afe656e
  Peng Lian authored Feb 22, 2022
  
  9afe656e
04 Jun, 2021 1 commit
- Update README.md -- design files misrepresented · e6516dc5
  Brandi Cantarel authored Jun 04, 2021
  
  e6516dc5
24 May, 2021 1 commit
- update testing · 6417cd7b
  Brandi Cantarel authored May 24, 2021
  
  6417cd7b
20 May, 2021 5 commits
- Merge branch 'singularity' into 'master' · f21d0604
  Brandi Cantarel authored May 20, 2021
```
Singularity

See merge request !10
```
  f21d0604
- Removed submodule · c19cb854
  Brandi Cantarel authored May 20, 2021
  
  c19cb854
- no need for process_scripts removing submodule · 2b87671a
  Brandi Cantarel authored May 20, 2021
  
  2b87671a
- Merge branch 'singularity' of git.biohpc.swmed.edu:BICF/Astrocyte/rnaseq into singularity · bf87d199
  Brandi Cantarel authored May 20, 2021
  
  bf87d199
- update README and config · b5e2828c
  Brandi Cantarel authored May 20, 2021
  
  b5e2828c
17 May, 2021 6 commits
- Fix syntaxt for mouse config. · 2a49ed98
  Venkat Malladi authored May 17, 2021
  
  2a49ed98
- Change the modules path to be relative. · 1b616617
  Venkat Malladi authored May 17, 2021
  
  1b616617
- Change the submodule strategy. · 720ce976
  Venkat Malladi authored May 17, 2021
  
  720ce976
- Fix CI to include config. · 32707e26
  Venkat Malladi authored May 17, 2021
  
  32707e26
- Change chachedir syntax. · 4fd9dec2
  Venkat Malladi authored May 17, 2021
  
  4fd9dec2
- testing singularity · b58a2175
  Brandi Cantarel authored May 17, 2021
  
  b58a2175
05 Oct, 2020 1 commit
- update main for singularity stat analysis · 6d3d64fe
  Brandi Cantarel authored Oct 05, 2020
  
  6d3d64fe
01 Oct, 2020 1 commit
- update with singularity · 9131c8e0
  Brandi Cantarel authored Oct 01, 2020
  
  9131c8e0
08 Sep, 2020 1 commit
- update for singularity · 5288e775
  Brandi Cantarel authored Sep 08, 2020
  
  5288e775
31 Aug, 2020 1 commit
- update pe/se trim/rna_align · 2d53d37c
  Brandi Cantarel authored Aug 31, 2020
  
  2d53d37c
20 Jul, 2020 1 commit
- update trim for se · 36711f28
  Brandi Cantarel authored Jul 20, 2020
  
  36711f28
26 Jun, 2020 1 commit
- change url to git@ modules · ff1544dd
  Brandi Cantarel authored Jun 26, 2020
  
  ff1544dd
22 May, 2020 2 commits
- update genect_rnaseq/statanal.sh · fa94e3bb
  Brandi Cantarel authored May 22, 2020
  
  fa94e3bb
- update process_scripts · e61e9861
  Brandi Cantarel authored May 22, 2020
  
  e61e9861
09 Apr, 2020 2 commits
- Merge branch 'master' of git.biohpc.swmed.edu:BICF/Astrocyte/rnaseq · 1ac0c0fc
  Brandi Cantarel authored Apr 09, 2020
  
  1ac0c0fc
- update from clinseq;move submodule · 1968a2e5
  Brandi Cantarel authored Apr 09, 2020
  
  1968a2e5
07 Jan, 2020 2 commits
- Merge branch '19-astrocyte_doc' into 'master' · aac993e7
  Venkat Malladi authored Jan 07, 2020
```
Fix documentationn for choosing only fastq files.

Closes #19

See merge request !9
```
  aac993e7
- Fix documentationn for choosing only fastq files. · 2e1df269
  Venkat Malladi authored Jan 07, 2020
  
  2e1df269
21 Oct, 2019 1 commit
- update stringtie · b2fdf539
  Brandi Cantarel authored Oct 21, 2019
  
  b2fdf539