update .gitlab-ci.yml submodule

2849dee4 · Brandi Cantarel · 86546928 · 2849dee4 · 2849dee4
Commit 2849dee4 authored Mar 15, 2018 by Brandi Cantarel
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -2,11 +2,11 @@
 # Brandi L. Cantarel - 2017
 variables:
-  TEST_BRANCH: "master"
+  GIT_SUBMODULE_STRATEGY: recursive
-  GIT_SUBMODULE_STATEGY: recursive
 before_script:
  - module load nextflow/0.27.6
+  - git submodule sync --recursive
 stages:
  - integration

--- a/nextflow.config
+++ b/nextflow.config
+process.executor='slurm'
+process.queue='super'
+process.clusterOptions = '--hold'
\ No newline at end of file