Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
C
chipseq_analysis
Manage
Activity
Members
Labels
Plan
Issues
19
Issue boards
Milestones
Iterations
Requirements
Code
Merge requests
3
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Locked files
Build
Pipelines
Jobs
Pipeline schedules
Test cases
Artifacts
Deploy
Releases
Container Registry
Operate
Environments
Monitor
Incidents
Service Desk
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Code review analytics
Issue analytics
Insights
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
BICF
Astrocyte
chipseq_analysis
Merge requests
!7
Add in experiment_id and check to see if unique replicate ids are given.
Code
Review changes
Check out branch
Download
Patches
Plain diff
Merged
Add in experiment_id and check to see if unique replicate ids are given.
10-grouping
into
master
Overview
0
Commits
1
Pipelines
1
Changes
4
Merged
Venkat Malladi
requested to merge
10-grouping
into
master
7 years ago
Overview
0
Commits
1
Pipelines
1
Changes
4
Expand
Closes
#10 (closed)
Adds in experiment_id and replicate check
0
0
Merge request reports
Compare
master
master (base)
and
latest version
latest version
2bb7f6ed
1 commit,
7 years ago
4 files
+
52
−
15
Expand all files
Preferences
File browser
List view
Tree view
Compare changes
Inline
Side-by-side
Show whitespace changes
Show one file at a time
Search (e.g. *.vue) (Ctrl+P)
test_data/design_ENCSR238SGC_SE.txt
+
5
−
5
Options
sample_id
biosample factor treatment replicate control_id fastq_read1
sample_id
experiment_id
biosample factor treatment replicate control_id fastq_read1
ENCSR238SGC limb H3K4me1 None 1 ENC
SR687ALB
ENCFF833BLU.fastq.gz
ENCBS844FSC
ENCSR238SGC limb H3K4me1 None 1 ENC
BS844FSC
ENCFF833BLU.fastq.gz
ENCSR238SGC limb H3K4me1 None 2 ENC
SR687ALB
ENCFF646LXU.fastq.gz
ENCBS892NXC
ENCSR238SGC limb H3K4me1 None 2 ENC
BS892NXC
ENCFF646LXU.fastq.gz
ENCSR687ALB limb Control None 1 ENC
SR687ALB
ENCFF524CAC.fastq.gz
ENCBS844FSC
ENCSR687ALB limb Control None 1 ENC
BS844FSC
ENCFF524CAC.fastq.gz
ENCSR687ALB limb Control None 2 ENC
SR687ALB
ENCFF163AJI.fastq.gz
ENCBS892NXC
ENCSR687ALB limb Control None 2 ENC
BS892NXC
ENCFF163AJI.fastq.gz