Resolve "Bam Stats and Filter" (!6) · Merge requests · BICF / Astrocyte / chipseq_analysis

Merged Resolve "Bam Stats and Filter"

4-stat-filter into master

Merged Venkat Malladi requested to merge 4-stat-filter into master 7 years ago

Oct 11, 2017
- Fix test. · f4b48e0b
  Venkat Malladi authored 7 years ago
  
  f4b48e0b
Oct 10, 2017
- Add in tests for single end sequencing. · eeb76613
  Venkat Malladi authored 7 years ago
  
  eeb76613
- Update files used. · b8588c1a
  Venkat Malladi authored 7 years ago
  
  b8588c1a
- Fix outputs. · c41e1217
  Venkat Malladi authored 7 years ago
  
  c41e1217
- Update paths and add in testing if file exists. · d7b9a6ba
  Venkat Malladi authored 7 years ago
  
  d7b9a6ba
- Fix spacing. · cb8162c6
  Venkat Malladi authored 7 years ago
  
  cb8162c6
- Update triming to have generalized paths. · d6a5bea0
  Venkat Malladi authored 7 years ago
  
  d6a5bea0
- Add header to pbc file. · 9b65c0bd
  Venkat Malladi authored 7 years ago
  
  9b65c0bd
- Update samtools version and synxtax to fix bugs in last push. · 2948ddca
  Venkat Malladi authored 7 years ago
  
  2948ddca
Oct 09, 2017
- Fix syntax to be tsv format. · ea8a20e5
  Venkat Malladi authored 7 years ago
  
  ea8a20e5
- Remove resume as it is ignored. · de6185ea
  Venkat Malladi authored 7 years ago
  
  de6185ea
- Add in option for resume. · 5ac11bb7
  Venkat Malladi authored 7 years ago
  
  5ac11bb7
- Fix option. · 2c4516e9
  Venkat Malladi authored 7 years ago
  
  2c4516e9
- Update incorrect line break. · adf18e06
  Venkat Malladi authored 7 years ago
  
  adf18e06
- update output. · 7d54e3fe
  Venkat Malladi authored 7 years ago
  
  7d54e3fe
- Add in steps to remove dups and filter reads. · 3a9a868b
  Venkat Malladi authored 7 years ago
  
  3a9a868b

Resolve "Bam Stats and Filter"

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