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Resolve "Use SampleIds/ Experiment Id as file names throughtout pipeline"

Merged Resolve "Use SampleIds/ Experiment Id as file names throughtout pipeline"
23-rename_output into master
Merged Venkat Malladi requested to merge 23-rename_output into master
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workflow/scripts/trim_reads.py
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@@ -89,7 +89,7 @@ def rename_reads(fastq, sample, paired):
# Great symbolic links
os.symlink(fastq[0], renamed_fastq[0])
return fastq_rename
return renamed_fastq
def trim_reads(fastq, paired):