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Commit fac677c3 authored by Venkat Malladi's avatar Venkat Malladi
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Fix trim reads input.

parent bf2be6c1
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1 merge request!20Resolve "Use SampleIds/ Experiment Id as file names throughtout pipeline"
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workflow/scripts/trim_reads.py
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......@@ -124,7 +124,7 @@ def main():
check_tools()
# Rename fastq files by sample
fastq_rename = rename_reads(fastq, sample paired)
fastq_rename = rename_reads(fastq, sample, paired)
# Run trim_reads
trim_reads(fastq_rename, paired)
......
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