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Commit d9572f4c authored by Venkat Malladi's avatar Venkat Malladi
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Add in nextflow test.

parent 2e634083
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1 merge request!5Resolve "Add mapping and trimming"
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in 45 minutes and 27 seconds
before_script:
- module add python/3.6.1-2-anaconda
- pip install --user pytest-pythonpath
- module load nextflow/0.24.1-SNAPSHOT
- ln -s /project/shared/bicf_workflow_ref/workflow_testdata/chipseq/*fastq.gz test_data/
test:
script:
- nextflow run workflow/main.nf
- pytest
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