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Commit c412f90f authored by Jeremy Mathews's avatar Jeremy Mathews
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new run

parent e4e239be
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1 merge request!54Resolve "Single control or experiment fails at call peaks macs"
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workflow/scripts/pool_and_psuedoreplicate.py
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......@@ -233,7 +233,7 @@ def generate_design(paired, cutoff_ratio, design_df, cwd, no_reps, no_unique_con
self_pseudoreplicates_dict = {}
for rep, tag_file in zip(design_df['replicate'], design_df['tag_align']):
replicate_prefix = experiment_id + '_' + str(rep)
self_pseudoreplicates_dict = self_psuedoreplication(tag_file, replicate_prefix, paired)
self_pseudoreplicates_dict[rep] = self_psuedoreplication(tag_file, replicate_prefix, paired)
# Update design to include new self pseudo replicates
......
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