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Commit bea49ca3 authored by Jeremy Mathews's avatar Jeremy Mathews
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update argv arguments

parent 4379c348
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1 merge request!54Resolve "Single control or experiment fails at call peaks macs"
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...@@ -63,9 +63,9 @@ def test_check_controls_single(design_experiment_3): ...@@ -63,9 +63,9 @@ def test_check_controls_single(design_experiment_3):
@pytest.mark.unit @pytest.mark.unit
def test_single_rep(design_experiment_2): def test_single_rep(design_experiment_2):
sys.argv.extend(['-d', design_experiment_2]) sys.argv.extend(['--design', design_experiment_2])
sys.argv.extend(['-p', 'true']) sys.argv.extend(['--paired', 'true'])
sys.argv.extend(['-c', 1.2]) sys.argv.extend(['--cutoff', 1.2])
single_rep = pool_and_psuedoreplicate.main() single_rep = pool_and_psuedoreplicate.main()
......
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