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Commit 970fea4b authored by Venkat Malladi's avatar Venkat Malladi
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Use python3 for testing the design file and use local for this.

parent 0205044c
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1 merge request!5Resolve "Add mapping and trimming"
......@@ -5,6 +5,7 @@ process {
// Process specific configuration
$checkDesignFile {
module = ['python/3.6.1-2-anaconda']
executor = 'local'
}
$trim_galore {
module = ['python/3.6.1-2-anaconda', 'trimgalore/0.4.1']
......
......@@ -48,7 +48,7 @@ process checkDesignFile {
if (pairedEnd) {
"""
python $baseDir/scripts/check_design.py -d $designFile -f $readsList -p
python3 $baseDir/scripts/check_design.py -d $designFile -f $readsList -p
"""
}
else {
......
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