Commit 34a5183e authored by Venkat Malladi's avatar Venkat Malladi
Browse files

Fix yml.

parent 2f1c6283
Pipeline #3250 failed with stages
in 455 minutes and 30 seconds
......@@ -6,9 +6,9 @@ before_script:
stages:
- unit
- skip
- single
- multiple
- skip
user_configuration:
stage: unit
......@@ -20,8 +20,6 @@ single_end_mouse:
stage: single
only:
- master
except:
- branches
script:
- nextflow run workflow/main.nf -resume
- pytest -m singleend
......@@ -32,8 +30,6 @@ paired_end_human:
stage: single
only:
- branches
except:
- master
script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR729LGA_PE.txt" --genome 'GRCh38' --pairedEnd true -resume
- pytest -m pairedend
......@@ -44,8 +40,6 @@ single_end_diff:
stage: multiple
only:
- branches
except:
- master
script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_diff_SE.txt" --genome 'GRCm38' -resume
- pytest -m singlediff
......@@ -55,8 +49,6 @@ single_end_diff:
paired_end_diff:
only:
- master
except:
- branches
stage: multiple
script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_diff_PE.txt" --genome 'GRCh38' --pairedEnd true -resume
......@@ -67,8 +59,6 @@ paired_end_diff:
single_end_skip:
stage: skip
only:
- branches
except:
- master
script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_diff_SE.txt" --genome 'GRCm38' --skipDiff true --skipMotif true -resume
......
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