Merge branch '7-macs2-peaks' of...

Merge branch '7-macs2-peaks' of git.biohpc.swmed.edu:BICF/Astrocyte/chipseq_analysis into 7-macs2-peaks

workflow/tests/test_call_peaks_macs.py

@@ -12,7 +12,7 @@ def test_call_peaks_macs_singleend():
     assert os.path.exists(os.path.join(test_output_path, 'ENCLB144FDT.fc_signal.bw'))
     assert os.path.exists(os.path.join(test_output_path, 'ENCLB144FDT.pvalue_signal.bw'))
     peak_file = test_output_path + 'ENCLB144FDT_peaks.narrowPeak'
-    assert utils.count_lines(peak_file) == '210349'
+    assert utils.count_lines(peak_file) == 210349
 
 
 def test_call_peaks_macs_pairedend():

workflow/tests/test_overlap_peaks.py

@@ -35,7 +35,7 @@ def test_check_update_design(design_diff):
 def test_overlap_peaks_singleend():
     assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC.rejected.narrowPeak'))
     peak_file = test_output_path + 'ENCSR238SGC.replicated.narrowPeak'
-    assert utils.count_lines(peak_file) == '150096'
+    assert utils.count_lines(peak_file) == 150096
 
 
 def test_call_peaks_macs_pairedend():