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Commit 06ef989b authored by Jeremy Mathews's avatar Jeremy Mathews
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parent 9c9fbeb5
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1 merge request!54Resolve "Single control or experiment fails at call peaks macs"
Pipeline #4344 canceled with stages
in 39 minutes and 29 seconds
......@@ -60,14 +60,6 @@ def test_check_controls_single(design_experiment_3):
assert no_controls == 1
@pytest.mark.unit
def test_generate_design(design_experiment_2):
control_df = pool_and_psuedoreplicate.get_read_count_ratio(design_experiment_2)
control_files = design_experiment_2.control_tag_align.unique()
pool_control = pool_and_psuedoreplicate.pool(control_files, "pool_control", "true")
new_design = pool_and_psuedoreplicate.generate_design(design_experiment_2, "false", "false", pool_control, "true", 1.2)
@pytest.mark.singleend
def test_pool_and_psuedoreplicate_singleend():
design_file = os.path.join(test_output_path, 'ENCSR238SGC_ppr.tsv')
......
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