User Facing

  • Fix design file not visible in Astrocyte
  • Fix handling of multiple flowcells in 1 submission


  • Move multiqc config to conf folder
  • Add CI test for multiple flowcells
  • Add changelog
  • Quote design/tarball/$baseDir path in processes in case of spaces

Known Bugs

  • cellranger mkfastq will not accept spaces in path for run param even if quoted, issue raised on 10XGenomics/cellranger github issue #31