Add error checking for filename/folder names

changed milestone to %v1.2.0

added To Do enhancement labels

mentioned in issue chipseq_analysis#45 (closed)

assigned to @s189701

mentioned in issue #21 (closed)

I just realized that the design file doesn't need a check because the python script can handle spaces and then it outputs a new file called design.checked.csv.

Also tarballed bcl file doesn't need to be checked because the bash script can handle spaces.

The check actually needs to go in the mkfastq process and it needs to check:

• check for spaces in dir and exit if yes for design file design from designPaths (don't need to worry about the filename because that is fixed)
• check for spaces in dir and exit if yes for bcl each bcl from bclPaths.collect() (don't need to worry about the filename because what is being sent to cellranger is just the folder location

added Doing label and removed To Do label

mentioned in merge request !31 (closed)

mentioned in merge request !32 (merged)

closed via merge request !32 (merged)

mentioned in commit cb07e20a

removed Doing label