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BICF
Astrocyte
cellranger_mkfastq
Commits
fef9d32e
Commit
fef9d32e
authored
Jul 22, 2019
by
Jeremy Mathews
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Update test files
parent
6955255a
Pipeline
#4446
failed with stages
in 2 minutes and 7 seconds
Changes
4
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1
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4 changed files
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5 additions
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5 deletions
+5
-5
workflow/tests/test_check_design.py
workflow/tests/test_check_design.py
+1
-1
workflow/tests/test_multiqc.py
workflow/tests/test_multiqc.py
+1
-1
workflow/tests/test_untarBCL.py
workflow/tests/test_untarBCL.py
+1
-1
workflow/tests/test_versions.py
workflow/tests/test_versions.py
+2
-2
No files found.
workflow/tests/test_check_design.py
View file @
fef9d32e
...
...
@@ -10,4 +10,4 @@ test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
@
pytest
.
mark
.
design
def
test_design
():
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
design
.
checked
.
csv
))
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
'design.checked.csv'
))
workflow/tests/test_multiqc.py
View file @
fef9d32e
...
...
@@ -10,4 +10,4 @@ test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
@
pytest
.
mark
.
multiqc
def
test_multiqc
():
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
multiqc_report
.
html
))
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
'multiqc_report.html'
))
workflow/tests/test_untarBCL.py
View file @
fef9d32e
...
...
@@ -10,4 +10,4 @@ test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
@
pytest
.
mark
.
untarBCL
def
test_untarBCL
():
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
RTAComplete
.
txt
))
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
'RTAComplete.txt'
))
workflow/tests/test_versions.py
View file @
fef9d32e
...
...
@@ -10,5 +10,5 @@ test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
@
pytest
.
mark
.
versions
def
test_versions
():
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
versions_mqc
.
yaml
))
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
references_mqc
.
yaml
))
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
'versions_mqc.yaml'
))
assert
os
.
path
.
exists
(
os
.
path
.
join
(
test_output_path
,
'references_mqc.yaml'
))
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