Skip to content
Snippets Groups Projects
Commit f9fc3534 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
Browse files

Update fastqc.sh

parent b8434187
Branches
Tags
1 merge request!45Develop
Pipeline #4720 passed with stages
......@@ -6,8 +6,4 @@
#* --------------------------------------------------------------------------
#*
find . -name '*.fastq.gz' | awk '{printf("fastqc \"%s\"\n", $0)}' | parallel -j $(grep -c ^processor /proc/cpuinfo) --verbose
#find . -name '*fastqc.*' | xargs -I '{}' mv '{}' ./
#for i in `ls *.fastq.gz`;
#do echo "fastqc ${i}";
#done | parallel -j `grep -c ^processor /proc/cpuinfo` --verbose;
find . -name '*.fastq.gz' | awk '{printf("fastqc \"%s\"\n", $0)}' | parallel -j $(grep -c ^processor /proc/cpuinfo) --verbose
\ No newline at end of file
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment