Merge branch '28-md_CI' into 'develop'

Resolve "Exclude changes in *.md for CI"

Closes #28

See merge request !43

.gitlab-ci.yml

@@ -14,6 +14,9 @@ stages:
 
 astrocyte_check:
   stage: astrocyte
+  except:
+    changes:
+      - "**/*.md"
   script:
     - astrocyte_cli check ../cellranger_mkfastq
   artifacts:
@@ -26,7 +29,10 @@ astrocyte_check:
 simple_1FC:
   stage: simple
   except:
-    - tags
+    changes:
+      - "**/*.md"
+    refs:
+      - tags
   script:
     - nextflow run workflow/main.nf --bcl "test_data/simple1/*.tar.gz" --designFile "test_data/simple1/cellranger-tiny-bcl-simple-1_2_0.csv"
     - pytest -m simple1
@@ -44,6 +50,9 @@ simple_1FC:
 
 simple_2FC:
   stage: simple
+  except:
+    changes:
+      - "**/*.md"
   script:
     - nextflow run workflow/main.nf --bcl "test_data/simple2/*.tar.gz" --designFile "test_data/simple2/cellranger-tiny-bcl-simple-1_2_0.csv"
     - pytest -m simple2

CHANGELOG.md

@@ -4,6 +4,7 @@
 
 **Background**
 * Add CI artifacts
+* Add Except md to CI
 
 *Known Bugs*
 * cellranger mkfastq will not accept spaces in path for run param even if quoted, issue raised on 10XGenomics/cellranger github issue [#31](https://github.com/10XGenomics/cellranger/issues/31)