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Commit ce84bf75 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Change withLabel to withName in bicf.config

parent 43d6de71
3 merge requests!59Develop,!58Develop,!5739 aws
Pipeline #5366 failed with stages
in 21 seconds
......@@ -4,29 +4,29 @@ process {
clusterOptions = '--hold'
container = 'docker://bicf/bicfbase:1.3'
withLabel:checkDesignFile {
withName:checkDesignFile {
container = 'docker://bicf/python3:1.2'
executor = 'local'
}
withLabel:untarBCL {
withName:untarBCL {
queue = 'super'
}
withLabel:mkfastq {
withName:mkfastq {
container = 'docker://bicf/cellranger3.1.0:1.0'
queue = '128GB,256GB,256GBv1,384GB'
}
withLabel:countDesign {
withName:countDesign {
executor = 'local'
}
withLabel:fastqc {
withName:fastqc {
module = ['fastqc/0.11.5', 'parallel']
executor = 'super'
}
withLabel:versions {
withName:versions {
module = ['python/3.6.1-2-anaconda', 'cellranger/3.0.2', 'bcl2fastq/2.19.1', 'fastqc/0.11.5']
executor = 'local'
}
withLabel:multiqc {
withName:multiqc {
container = 'docker://bicf/multiqc:1.4'
executor = 'local'
}
......
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