Commit c4f7f5d3 authored by Gervaise Henry's avatar Gervaise Henry 🤠

Update references.md

parent a58e00be
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1. **python**:
* Anaconda (Anaconda Software Distribution, [https://anaconda.com](https://anaconda.com))
2. **pigz**
* pigz [https://zlib.net/pigz/](https://zlib.net/pigz/)
2. **pigz**:
* parallel implementation of gzip [https://zlib.net/pigz/](https://zlib.net/pigz/)
3. **cellranger**
* Cellranger mkfastq [https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/using/mkfastq](https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/using/mkfastq)
3. **bcl2fastq**:
* Ilumina's bcl2fastq [https://support.illumina.com/sequencing/sequencing_software/bcl2fastq-conversion-software.html](https://support.illumina.com/sequencing/sequencing_software/bcl2fastq-conversion-software.html)
4. **fastqc**
3. **cellranger**:
* 10x Genomics cellranger mkfastq [https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/using/mkfastq](https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/using/mkfastq)
4. **fastqc**:
* fastqc [https://www.bioinformatics.babraham.ac.uk/projects/fastqc/](https://www.bioinformatics.babraham.ac.uk/projects/fastqc/)
5. **MultiQc**:
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