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cellranger_mkfastq
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BICF
Astrocyte
cellranger_mkfastq
Commits
5326d1be
Commit
5326d1be
authored
3 years ago
by
Venkat Malladi
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Add astrocyte to ver version 0.4.1
parent
52c52f08
1 merge request
!71
WIP: Astrocyte 0.4.0
Pipeline
#10245
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in 5 seconds
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astrocyte_pkg.yml
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astrocyte_pkg.yml
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5326d1be
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@@ -27,7 +27,7 @@ citation: |
# The minimum Astrocyte version that requires to run this workflow. For old pipelines, which do not have this label
# a default value of 0.3.1 will be assigned automatically. A request of minimum version less than 0.4.0 will be ignored.
minimum_astrocyte_version
:
'
0.4.
0
'
minimum_astrocyte_version
:
'
0.4.
1
'
# The Nextflow version that requires to run this workflow. For old pipelines, which do not have this label
# a default value of 0.31.0 will be assigned automatically. Please make sure the requested nextflow version is available
# in the module list.
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...
@@ -60,7 +60,17 @@ documentation_files:
# A list of cluster environment modules that this workflow requires to run.
# Specify versioned module names to ensure reproducability.
workflow_modules
:
-
'
python/3.6.1-2-anaconda'
-
Test
# A list of container images requires to run this workflow.
# Specify full path and version names to ensure reproducability.
workflow_containers
:
-
docker://bicf/python3:2.0.1_indev
-
docker://bicf/bicfbase:2.0.1_indev
-
docker://bicf/cellranger4.0.0:2.0.0_indev
-
docker://bicf/fastqc:2.0.1_indev
-
docler://bicf/multiqc:2.0.1_indev
# A list of parameters used by the workflow, defining how to present them,
# options etc in the web interface. For each parameter:
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