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Commit 151db2cf authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Update CHANGELOG.md

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# v1.2.0 (in development)
# v1.3.0 (in development)
**User Facing**
**Background**
*Known Bugs*
* cellranger mkfastq will not accept spaces in path for run param even if quoted, issue raised on 10XGenomics/cellranger github issue [#31](https://github.com/10XGenomics/cellranger/issues/31)
* note: 10x doesn't check github issues, emailed instead
* note: pipeline checks for spaces and exits prematurely if found
* If multiple flowcells (tar'd) files are inputted then there will be multiple fastq's by the same name, currently dealing with that name conflict is not tractable
* note: if multiple bcl files are detected then cellranger_count design file is not created
# v1.2.0
**User Facing**
* Add references to of tools to mutiQC report
* Add BICF details to multiqc report
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