Merge requests · BICF / Astrocyte / cellranger_count

Merge trains

Add new lib options to biohpc config

!81 · created Nov 20, 2020 by Gervaise Henry 3.0.0
Doing critical
updated Nov 20, 2020
Resolve "Add 5GEXPE/SE as library options"

!80 · created Nov 20, 2020 by Gervaise Henry 3.0.0
Doing critical
updated Nov 20, 2020
Update CHANGELOG.md, workflow/main.nf, workflow/nextflow.config files

!79 · created Aug 15, 2020 by Gervaise Henry 2.2.0 master
updated Aug 15, 2020
Develop

!78 · created Aug 15, 2020 by Gervaise Henry 2.2.0 master
updated Aug 15, 2020
Updated Zenodo id 0 of 7 checklist items completed

!77 · created Aug 15, 2020 by Venkat Malladi 2.2.0
To Do
- Closed
- 3
updated Aug 15, 2020
Resolve "Generate Raw RDS file" 7 of 7 checklist items completed

!76 · created Aug 14, 2020 by Gervaise Henry 2.2.0
Doing enhancement
updated Aug 14, 2020
Cellranger 4.0.0 ref 2020 a

!75 · created Aug 13, 2020 by Gervaise Henry 2.2.0 50-seurat.object
updated Aug 13, 2020
Fix multi sample, local ulimit set, v2.1.1

!74 · created Jun 21, 2020 by Gervaise Henry v2.1.1 master
updated Jun 21, 2020
Develop

!73 · created Jun 21, 2020 by Gervaise Henry v2.1.1 master
updated Jun 21, 2020
Update configs folder name 0 of 7 checklist items completed

!72 · created Jun 21, 2020 by Gervaise Henry v2.1.1
updated Jun 21, 2020
De containerize 2 of 7 checklist items completed

!71 · created Jun 21, 2020 by Gervaise Henry v2.1.1
updated Jun 21, 2020
Develop

!70 · created May 25, 2020 by Gervaise Henry v2.1.1 master
updated May 25, 2020
Remove multiqc module 3 of 7 checklist items completed

!69 · created Apr 26, 2020 by Gervaise Henry
To Do bug
updated Apr 26, 2020
Track.pipeline 3 of 7 checklist items completed

!68 · created Apr 25, 2020 by Gervaise Henry
updated Apr 25, 2020
Develop 1 of 7 checklist items completed

!67 · created Apr 20, 2020 by Gervaise Henry v2.1.1 master
updated Apr 20, 2020
Add ulimit -u to all cellranger processes 2 of 7 checklist items completed

!66 · created Apr 20, 2020 by Gervaise Henry v2.1.1
Doing To Do bug confirmed critical
updated Apr 20, 2020
Drop indev in version, finish adding aws details

!65 · created Apr 16, 2020 by Gervaise Henry
updated Apr 16, 2020
Master

!64 · created Apr 16, 2020 by Gervaise Henry
updated Apr 16, 2020
Develop 6 of 7 checklist items completed

!63 · created Apr 15, 2020 by Gervaise Henry master
updated Apr 15, 2020
Resolve "Containerize"

!62 · created Apr 15, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020