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Resolve "Remove reference genome full folder"

Merged Gervaise Henry requested to merge 2-ref.genome.folder into develop
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@@ -6,7 +6,7 @@
// Define Input variables
params.fastq = "$baseDir/../test_data/*.fastq.gz"
params.designFile = "$baseDir/../test_data/design.csv"
params.genome = '/project/apps_database/cellranger/refdata-cellranger-GRCh38-1.2.0'
params.genome = 'refdata-cellranger-GRCh38-1.2.0'
params.expectCells = 10000
params.forceCells = 0
params.version = '3.0.2'
@@ -21,7 +21,7 @@ fastqList = Channel
.map { file -> [ file.getFileName().toString(), file.toString() ].join("\t") }
.collectFile(name: 'fileList.tsv', newLine: true)
refLocation = Channel
.fromPath(params.genome)
.fromPath('/project/apps_database/cellranger/'+params.genome)
.ifEmpty { exit 1, "referene not found: ${params.genome}" }
expectCells = params.expectCells
forceCells = params.forceCells