Skip to content
Snippets Groups Projects

Resolve "Add cellranger references version 3.0.0 as options"

Merged Resolve "Add cellranger references version 3.0.0 as options"
9-cellranger_ref3.0.0 into develop
Merged Gervaise Henry requested to merge 9-cellranger_ref3.0.0 into develop
Compare
and
1 file
+ 8
− 4
Preferences
File browser
Compare changes
astrocyte_pkg.yml
+ 8
− 4
@@ -97,10 +97,14 @@ workflow_parameters:
- id: genome
type: select
choices:
- [ '/project/apps_database/cellranger/refdata-cellranger-GRCh38-1.2.0', 'Human GRCh38']
- [ '/project/apps_database/cellranger/refdata-cellranger-hg19-1.2.0', 'Human GRCh37 (hg19)']
- [ '/project/apps_database/cellranger/refdata-cellranger-mm10-1.2.0', 'Mouse GRCm38 (mm10)']
- [ '/project/apps_database/cellranger/refdata-cellranger-hg19_and_mm10-1.2.0', 'Human GRCh37 (hg19) + Mouse GRCm38 (mm19)']
- [ '/project/apps_database/cellranger/refdata-cellranger-GRCh38-3.0.0', 'Human GRCh38 release 93']
- [ '/project/apps_database/cellranger/refdata-cellranger-GRCh38-1.2.0', 'Human GRCh38 release 84']
- [ '/project/apps_database/cellranger/refdata-cellranger-hg19-3.0.0', 'Human GRCh37 (hg19) release 87']
- [ '/project/apps_database/cellranger/refdata-cellranger-hg19-1.2.0', 'Human GRCh37 (hg19) release 84']
- [ '/project/apps_database/cellranger/refdata-cellranger-mm10-3.0.0', 'Mouse GRCm38 (mm10) release 93']
- [ '/project/apps_database/cellranger/refdata-cellranger-mm10-1.2.0', 'Mouse GRCm38 (mm10) release 84']
- [ '/project/apps_database/cellranger/refdata-cellranger-hg19_and_mm10-3.0.0', 'Human GRCh37 (hg19) + Mouse GRCm38 (mm19) release 93']
- [ '/project/apps_database/cellranger/refdata-cellranger-hg19_and_mm10-1.2.0', 'Human GRCh37 (hg19) + Mouse GRCm38 (mm19) release 84']
- [ '/project/apps_database/cellranger/refdata-cellranger-ercc92-1.2.0', 'ERCC.92 Spike-In']
required: true
description: |