Check for space in design file error

See cellranger_mkfastq#31 (closed)

changed milestone to %v2.1.1

added bug label

assigned to @ghenry and unassigned @s189701

noSpaceDesign=\$(echo "${designLocation}" | tr -d ' ')
    if [[ "\${noSpaceDesign}" != "${designLocation}" ]]; then
      mv "${designLocation}" "\${noSpaceDesign}"
    fi

Should be able to add this code into the main.nf in checkDesignFile process. Right before python3 ${baseDir}/scripts/check_design.py -d \${noSpaceDesign}

See mkfastq: same thing, easy fix

assigned to @s189701 and unassigned @ghenry

mentioned in merge request !58 (merged)

closed via merge request !58 (merged)

mentioned in commit 2c696901