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Commit d131ee9c authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Remove container seurat test until container is fixed

parent af278bb7
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2 merge requests!78Develop,!76Resolve "Generate Raw RDS file"
Pipeline #7879 canceled with stages
in 1 minute and 51 seconds
......@@ -242,30 +242,6 @@ container_4.0.0_test:
when:
- always
container_seurat_test:
stage: container_test
only:
- branches
except:
refs:
- develop
- master
- tags
script:
- ln -sfn test_data/output/* .
- singularity run 'docker://bicf/seurat:2.0.0_indev' Rscript workflow/scripts/downstream_viz.r --sample sample1 --cellrangerVersion 4.0.0
- singularity run 'docker://bicf/seurat:2.0.0_indev' bash workflow/scripts/versions_seurat.sh > version_seurat.txt
artifacts:
name: "$CI_JOB_NAME"
when: always
paths:
- version_seurat.txt
expire_in: 2 days
retry:
max: 0
when:
- always
GRCh38-2020A:
stage: reference_test
only:
......
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