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atacseq_analysis
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BICF
Astrocyte
atacseq_analysis
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361d60dfa5eea00a7a373faf80836b5a4faaf838
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36-UpdateNextflow
dev
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master
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publish_2.0.4
publish_2.0.3
publish_1.0.0
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Merge branch 'dev' into 'master'
publish_2.0.4 m…
publish_2.0.4 master
Update to publish 2.0.4 to fix memory issue.
dev
dev
Merge branch '43-long_read_fix' into 'dev'
Update configuration for queue to fix large number of reads.
Merge branch '41-astrocyte-cli' into 'dev'
Update changlog for astrocyte support.
Add in astrocyte 0.3.1 test.
update readme.
fix file path.
publish_2.0.3
publish_2.0.3
Fix path to design file so that its passed ocorrectly for astrocyte.
Fix design file name.
Merge branch '40-astrocyte_fixes' into 'master'
Fix bwa Index name.
Fix typos
Update changelog with version.
Clean up and fix astrocyte configurations.
Merge branch '39-astrocyte_cli' into 'master'
Move logic ahead of redo for blacklist.
move up code to be generalizable.
Fix astrocyte bedtools version. Also consolidated blacklist code.
Fix json.
Fix pipeline.
Fix track pipeline.
Added in pipeline tracker as well as testing for astrocyte.
fix references.
Fix conf file syntax.
Fix version of cli.
update changelog version.
Update config.
Update to include astrocyte config tests and references.
Merge branch '32-annotatePeaks' into 'master'
Resolved merge conflicts
fix errors
Merge branch '31-BlacklistRegions' into 'master'
Merge branch '27-FragSizeDist' into 'master'
fix errors
Merge branch 'master' into '31-BlacklistRegions'
fix SE test
Merge branch '31-BlacklistRegions' of git.biohpc.swmed.edu:BICF/Astrocyte/atacseq_analysis into 31-BlacklistRegions
fix testing error