simplified design file; issue 12 (be6dfb3c) · Commits · BICF / Astrocyte / atacseq_analysis · GitLab

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BICF
Astrocyte
atacseq_analysis
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be6dfb3c

Commit be6dfb3c authored 5 years ago by

Holly Ruess

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simplified design file; issue 12

parent d1b33e15

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1 merge request!2Resolve "Remove unnecessary columns from design file"

Changes 10

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test_data/design_ENCSR265ZXX_SE.txt 4 additions, 4 deletions

test_data/design_ENCSR265ZXX_SE.txt
test_data/design_ENCSR451NAE_PE.txt 3 additions, 3 deletions

test_data/design_ENCSR451NAE_PE.txt
workflow/conf/biohpc.config 6 additions, 6 deletions

workflow/conf/biohpc.config
workflow/main.nf 27 additions, 27 deletions

workflow/main.nf
workflow/scripts/check_design.py 0 additions, 3 deletions

workflow/scripts/check_design.py
workflow/tests/test_check_design.py 5 additions, 5 deletions

workflow/tests/test_check_design.py
workflow/tests/test_experiment_design.py 5 additions, 5 deletions

workflow/tests/test_experiment_design.py
workflow/tests/test_experiment_qc.py 5 additions, 5 deletions

workflow/tests/test_experiment_qc.py
workflow/tests/test_overlap_peaks.py 5 additions, 5 deletions

workflow/tests/test_overlap_peaks.py
workflow/tests/test_pool_and_psuedoreplicate.py 3 additions, 3 deletions

workflow/tests/test_pool_and_psuedoreplicate.py

with 63 additions and 66 deletions

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