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atacseq_analysis
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BICF
Astrocyte
atacseq_analysis
Commits
66fd50c5
Commit
66fd50c5
authored
Jun 21, 2020
by
Venkat Malladi
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Fix design file name.
parent
fc1a4e59
Pipeline
#7384
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in 9 seconds
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CHANGELOG.md
CHANGELOG.md
+1
-1
astrocyte_pkg.yml
astrocyte_pkg.yml
+1
-1
workflow/main.nf
workflow/main.nf
+1
-1
workflow/nextflow.config
workflow/nextflow.config
+1
-1
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CHANGELOG.md
View file @
66fd50c5
...
...
@@ -2,7 +2,7 @@
All notable changes to this project will be documented in this file.
## [publish_2.0.
1 ] - 2020-06-19
## [publish_2.0.
2 ] - 2020-06-21
### Fixed
-
Removed biosample, factor, treatment from design file
-
Updated documentation
...
...
astrocyte_pkg.yml
View file @
66fd50c5
...
...
@@ -123,7 +123,7 @@ workflow_parameters:
If you would like these regions excluded from replicated peaks, select
True. (recommended)
-
id
:
design
-
id
:
design
File
type
:
file
required
:
true
description
:
|
...
...
workflow/main.nf
View file @
66fd50c5
...
...
@@ -100,7 +100,7 @@ process trackStart {
"astrocyte": ${params.astrocyte}, \
"status": "started", \
"nextflowVersion": "${workflow.nextflow.version}", \
"pipelineVersion": "2.0.
0
", \
"pipelineVersion": "2.0.
2
", \
"ci": ${params.ci}, \
"dev": ${params.dev}}' \
"https://xku43pcwnf.execute-api.us-east-1.amazonaws.com/ProdDeploy/pipeline-tracking"
...
...
workflow/nextflow.config
View file @
66fd50c5
...
...
@@ -25,7 +25,7 @@ manifest {
name
=
'atacseq_analysis'
description
=
'BICF ATAC-seq Analysis Workflow.'
homePage
=
'https://git.biohpc.swmed.edu/BICF/Astrocyte/atacseq_analysis'
version
=
'2.0.
1
'
version
=
'2.0.
2
'
mainScript
=
'main.nf'
nextflowVersion
=
'>=0.31.0'
}
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