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atacseq_analysis
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BICF
Astrocyte
atacseq_analysis
Commits
5e608f93
Commit
5e608f93
authored
Jun 05, 2020
by
Holly Ruess
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fix core dump issue
parent
8718d577
Pipeline
#7083
failed with stages
in 390 minutes and 24 seconds
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5e608f93
...
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@@ -20,7 +20,7 @@ single_end_human:
-
branches
-
master
script
:
-
nextflow run workflow/main.nf
-
NXF_OPTS="-Dleveldb.mmap=false"
nextflow run workflow/main.nf
-
pytest -m singleend_human
...
...
@@ -30,5 +30,5 @@ paired_end_mouse:
-
branches
-
master
script
:
-
nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR451NAE_PE.txt" --genome 'GRCm38' --pairedEnd
true
--blacklist
true
-
NXF_OPTS="-Dleveldb.mmap=false"
nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR451NAE_PE.txt" --genome 'GRCm38' --pairedEnd
true
--blacklist
true
-
pytest -m pairedend_mouse
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