adding modified dastk scripts for atac seq analysis (a8df6a7a) · Commits · BICF / Astrocyte / DAStk_modified · GitLab

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BICF
Astrocyte
DAStk_modified
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a8df6a7a

Commit a8df6a7a authored 6 years ago by

Spencer Barnes

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adding modified dastk scripts for atac seq analysis

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DAStk/._config 0 additions, 0 deletions

DAStk/._config
DAStk/.ipynb_checkpoints/daskt_testing-checkpoint.ipynb 6 additions, 0 deletions

DAStk/.ipynb_checkpoints/daskt_testing-checkpoint.ipynb
DAStk/__init__.py 8 additions, 0 deletions

DAStk/__init__.py
DAStk/config/sample_config.py 2 additions, 0 deletions

DAStk/config/sample_config.py
DAStk/differential_md_score.py 196 additions, 0 deletions

DAStk/differential_md_score.py
DAStk/process_atac.py 256 additions, 0 deletions

DAStk/process_atac.py
DAStk/tf_activity_changes 33 additions, 0 deletions

DAStk/tf_activity_changes
LICENSE 29 additions, 0 deletions

LICENSE
README.md 107 additions, 0 deletions

README.md
create_conda_environment.sh 6 additions, 0 deletions

create_conda_environment.sh
doc_files/sample_MA_plot.png 0 additions, 0 deletions

doc_files/sample_MA_plot.png
doc_files/sample_barcode_plot.png 0 additions, 0 deletions

doc_files/sample_barcode_plot.png
setup.cfg 6 additions, 0 deletions

setup.cfg
setup.py 64 additions, 0 deletions

setup.py

with 713 additions and 0 deletions

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