05c6cfd0 · 05c6cfd0 · 05c6cfd0 · 05c6cfd0 · 05c6cfd0 · 05c6cfd0
--- a/analysis/Histone_TFSEE/box_plot_cluster_2.png
+++ b/analysis/Histone_TFSEE/box_plot_cluster_2.png
--- a/analysis/Histone_TFSEE/box_plot_cluster_2_enhancers_rpkm.png
+++ b/analysis/Histone_TFSEE/box_plot_cluster_2_enhancers_rpkm.png
--- a/analysis/Histone_TFSEE/box_plot_cluster_2_genes_fpkm.png
+++ b/analysis/Histone_TFSEE/box_plot_cluster_2_genes_fpkm.png
--- a/analysis/Histone_TFSEE/box_plot_cluster_2_tfs_fpkm.png
+++ b/analysis/Histone_TFSEE/box_plot_cluster_2_tfs_fpkm.png
--- a/analysis/Histone_TFSEE/box_plot_cluster_3.png
+++ b/analysis/Histone_TFSEE/box_plot_cluster_3.png
--- a/analysis/Histone_TFSEE/box_plot_cluster_3_enhancers_rpkm.png
+++ b/analysis/Histone_TFSEE/box_plot_cluster_3_enhancers_rpkm.png
--- a/analysis/Histone_TFSEE/box_plot_cluster_3_genes_fpkm.png
+++ b/analysis/Histone_TFSEE/box_plot_cluster_3_genes_fpkm.png
--- a/analysis/Histone_TFSEE/box_plot_cluster_3_tfs_fpkm.png
+++ b/analysis/Histone_TFSEE/box_plot_cluster_3_tfs_fpkm.png
--- a/GRO_seq_TFSEE/closest_genes.py
+++ b/GRO_seq_TFSEE/closest_genes.py
--- a/GRO_seq_TFSEE/closest_genes.sh
+++ b/GRO_seq_TFSEE/closest_genes.sh
--- a/analysis/Histone_TFSEE/cluster2_enriched_tfs.png
+++ b/analysis/Histone_TFSEE/cluster2_enriched_tfs.png
--- a/analysis/Histone_TFSEE/cluster3_enriched_tfs.png
+++ b/analysis/Histone_TFSEE/cluster3_enriched_tfs.png
--- a/analysis/Histone_TFSEE/cluster_2_enhancers.csv
+++ b/analysis/Histone_TFSEE/cluster_2_enhancers.csv
--- a/Histone_TFSEE/cluster_1_tfs.csv
+++ b/Histone_TFSEE/cluster_1_tfs.csv
--- a/analysis/Histone_TFSEE/cluster_3_enhancers.csv
+++ b/analysis/Histone_TFSEE/cluster_3_enhancers.csv
--- a/Histone_TFSEE/cluster_3_tfs.csv
+++ b/Histone_TFSEE/cluster_3_tfs.csv
--- a/Histone_TFSEE/clustering_tfs.csv
+++ b/Histone_TFSEE/clustering_tfs.csv
--- a/Histone_TFSEE/final_full_cluster_heatmap.png
+++ b/Histone_TFSEE/final_full_cluster_heatmap.png
--- a/Histone_TFSEE/final_full_cluster_z_score.csv
+++ b/Histone_TFSEE/final_full_cluster_z_score.csv
--- a/Histone_TFSEE/find_the_clusters.py
+++ b/Histone_TFSEE/find_the_clusters.py
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