Commits · master · Vishruth Mullapudi / mutation_alascan_ddg

14 Jul, 2022 17 commits
- Update README.md · 95fb4419
  Vishruth Mullapudi authored Jul 14, 2022
  
  95fb4419
- Update Usage.md · 07f0df80
  Vishruth Mullapudi authored Jul 14, 2022
  
  07f0df80
- Update Usage.md · 1020835c
  Vishruth Mullapudi authored Jul 14, 2022
  
  1020835c
- Update Usage.md · 606e4508
  Vishruth Mullapudi authored Jul 14, 2022
  
  606e4508
- Update Usage.md · 31b16436
  Vishruth Mullapudi authored Jul 14, 2022
  
  31b16436
- Update README.md · b4dfbf77
  Vishruth Mullapudi authored Jul 14, 2022
  
  b4dfbf77
- updated usage files · 2a509480
  Vishruth Mullapudi authored Jul 14, 2022
  
  2a509480
- added scoring info · 8b275cec
  Vishruth Mullapudi authored Jul 14, 2022
  
  8b275cec
- added sample output, usage of mutation scan · 055cfd58
  Vishruth Mullapudi authored Jul 14, 2022
  
  055cfd58
- Merge branch 'master' of https://git.biohpc.swmed.edu/s184069/flex_ddg_ala_scn_runner · 64448d8c
  Vishruth Mullapudi authored Jul 14, 2022
  
  64448d8c
- update to conda definition, readme · 7c9189a1
  Vishruth Mullapudi authored Jul 14, 2022
  
  7c9189a1
- update to conda definition, readme · 09b80ac6
  Vishruth Mullapudi authored Jul 14, 2022
  
  09b80ac6
- update readme, start usage · 11735115
  Vishruth Mullapudi authored Jul 14, 2022
  
  11735115
- Merge branch 'master' of https://git.biohpc.swmed.edu/s184069/flex_ddg_ala_scn_runner · d5927098
  Vishruth Mullapudi authored Jul 14, 2022
  
  d5927098
- update to LICENSE and README · f50cf61c
  Vishruth Mullapudi authored Jul 14, 2022
  
  f50cf61c
- update to LICENSE · 3bc24fe5
  Vishruth Mullapudi authored Jul 14, 2022
  
  3bc24fe5
- updates to readme and license · 08a02d4d
  Vishruth Mullapudi authored Jul 14, 2022
  
  08a02d4d
30 Jun, 2022 1 commit
- Update README.rst · 9c0f2989
  Vishruth Mullapudi authored Jun 30, 2022
  
  9c0f2989
14 Jun, 2022 6 commits
- added sample slurm script and dependency installation · 7d04f49e
  Vishruth Mullapudi authored Jun 14, 2022
  
  7d04f49e
- Merge branch 'pregen_resfiles' into 'master' · ef01af19
  Vishruth Mullapudi authored Jun 14, 2022
```
Pregen resfiles

See merge request !2
```
  ef01af19
- fixed commandline helptext, made num cpu parameter consistent · 50bf40ab
  Vishruth Mullapudi authored Jun 14, 2022
  
  50bf40ab
- reorgonization, make interface consistent, have analysis scripts read from config file · 01093d9a
  Vishruth Mullapudi authored Jun 14, 2022
  
  01093d9a
- fixed all variants, setup examples · 3a93a647
  Vishruth Mullapudi authored Jun 14, 2022
  
  3a93a647
- reorganization · d04763e9
  Vishruth Mullapudi authored Jun 14, 2022
  
  d04763e9
13 Jun, 2022 15 commits
- added seed randomization · ccf5c893
  Vishruth Mullapudi authored Jun 13, 2022
  
  ccf5c893
- completed changes to mutation scan and accompanying analysis scripts · 78892281
  Vishruth Mullapudi authored Jun 13, 2022
  
  78892281
- fixed issue with migration to threadpool executor · 937ccbea
  Vishruth Mullapudi authored Jun 13, 2022
  
  937ccbea
- Merge branch 'pregen_resfiles' of... · c06f4f45
  Vishruth Mullapudi authored Jun 13, 2022
```
Merge branch 'pregen_resfiles' of git.biohpc.swmed.edu:s184069/flex_ddg_ala_scn_runner into pregen_resfiles
```
  c06f4f45
- type · 9e3356ee
  Vishruth Mullapudi authored Jun 13, 2022
  
  9e3356ee
- type · fef7eea8
  Vishruth Mullapudi authored Jun 13, 2022
  
  fef7eea8
- removed generator, · 9590388e
  Vishruth Mullapudi authored Jun 13, 2022
  
  9590388e
- Merge branch 'pregen_resfiles' of... · e4b364af
  Vishruth Mullapudi authored Jun 13, 2022
```
Merge branch 'pregen_resfiles' of git.biohpc.swmed.edu:s184069/flex_ddg_ala_scn_runner into pregen_resfiles
```
  e4b364af
- fixed typo · c896679b
  Vishruth Mullapudi authored Jun 13, 2022
  
  c896679b
- fixed type · c49312e9
  Vishruth Mullapudi authored Jun 13, 2022
  
  c49312e9
- Merge remote-tracking branch 'refs/remotes/origin/pregen_resfiles' into pregen_resfiles · ae6494a8
  Vishruth Mullapudi authored Jun 13, 2022
  
  ae6494a8
- Merge remote-tracking branch 'refs/remotes/origin/pregen_resfiles' into pregen_resfiles · d4e53f9c
  Vishruth Mullapudi authored Jun 13, 2022
  
  d4e53f9c
- Merge remote-tracking branch 'refs/remotes/origin/pregen_resfiles' into pregen_resfiles · e37d1e06
  Vishruth Mullapudi authored Jun 13, 2022
  
  e37d1e06
- Reworked code for mutation scanning · 7a88f39d
  Vishruth Mullapudi authored Jun 13, 2022
  
  7a88f39d
- Reworked code for mutation scanning · a04c850e
  Vishruth Mullapudi authored Jun 13, 2022
  
  a04c850e
08 Jun, 2022 1 commit
- created configs · a2bd76a1
  Vishruth Mullapudi authored Jun 08, 2022
  
  a2bd76a1