Merge requests · GUDMAP_RBK / RNA-seq

Merge trains

Develop

!43 · created Aug 27, 2020 by Gervaise Henry 0.0.3 master
updated Aug 27, 2020
Develop

!41 · created Aug 20, 2020 by Gervaise Henry v0.0.2 master
updated Aug 20, 2020
Develop

!32 · created Apr 30, 2020 by Gervaise Henry 10-process.aggregateQC
updated Apr 30, 2020
Develop

!31 · created Apr 27, 2020 by Gervaise Henry 10-process.aggregateQC
updated Apr 27, 2020
Develop

!27 · created Apr 07, 2020 by Gervaise Henry 47-move.inference
updated Apr 07, 2020
Develop

!24 · created Mar 16, 2020 by Gervaise Henry v0.0.1 6-processCounts
updated Mar 16, 2020
Develop

!13 · created Jan 18, 2020 by Gervaise Henry 2-process_createManifest
updated Jan 18, 2020
Develop

!11 · created Jan 17, 2020 by Gervaise Henry 2-process_createManifest
updated Jan 17, 2020
Develop

!6 · created Dec 11, 2019 by Gervaise Henry 15-auto.bagit.download
updated Dec 11, 2019
Develop 1 of 7 checklist items completed

!4 · created Nov 15, 2019 by Gervaise Henry v0.0.1 2-process_createManifest
- Merged
updated Nov 15, 2019
Ci 3 of 10 checklist items completed

!35 · created Jul 31, 2020 by Gervaise Henry
updated Jul 31, 2020
Changed the spelling of inferred. 2 of 3 checklist items completed

!89 · created Jul 16, 2021 by Venkat Malladi v2.0.1
To Do bug pipeline
- Merged
- 7
updated Jul 16, 2021
aws.batch 5 of 9 checklist items completed

!34 · created Jul 30, 2020 by Gervaise Henry
updated Jul 30, 2020
Add started time to multiqc #77

!44 · created Aug 31, 2020 by Gervaise Henry
updated Sep 01, 2020
Add seqtype override 5 of 5 checklist items completed

!93 · created Jul 25, 2021 by Gervaise Henry v2.0.1
To Do confirmed critical enhancement pipeline
- Merged
- Approved
updated Jul 26, 2021
Add run details to output bag

!51 · created Nov 19, 2020 by Jeremy Mathews 1.0.0
Doing
- Merged
- 7
- Approved
updated Nov 20, 2020
Add extra params for tracking

!30 · created Apr 27, 2020 by Gervaise Henry v0.0.1
updated Apr 27, 2020
Added trimming step using trimGalore and logging. 1 of 7 checklist items completed

!3 · created Nov 11, 2019 by Jonathan Gesell v0.0.1
Doing
- Merged
updated Nov 14, 2019
Add back parallel trim step. Moved fastqc step after trim. 5 of 12 checklist items completed

!50 · created Nov 12, 2020 by Venkat Malladi FUTURE Version
To Do enhancement
- Merged
- 8
- Approved
updated Nov 19, 2020
0.0.3 10 of 10 checklist items completed

!42 · created Aug 24, 2020 by Gervaise Henry 0.0.3
updated Aug 27, 2020