1 2 3 4 5 6 7 #!/bin/bash bdbag --resolve-fetch all --fetch-filter filename\$*fastq.gz $1 for i in $(find */ -name "*.R*.fastq.gz"); do path=${2}$(echo ${i##*/} | grep -o "\.R.\.fastq\.gz"); mv ${i} ./${path} done;
#!/bin/bash bdbag --resolve-fetch all --fetch-filter filename\$*fastq.gz $1 for i in $(find */ -name "*.R*.fastq.gz"); do path=${2}$(echo ${i##*/} | grep -o "\.R.\.fastq\.gz"); mv ${i} ./${path} done;
Gervaise Henry authoredbbcfbd9f